Here's a blip from Mr. Mohler:
The bottom line is that these books and this movie will attract a lot of attention and will captivate many readers and viewers.
So, what's the problem?
This is not just any fantasy trilogy or film project. Philip Pullman has an agenda -- an agenda about as subtle as an army tank. His agenda is nothing less than to expose what he believes is the tyranny of the Christian faith and the Christian church. His hatred of the biblical storyline is clear. He is an atheist whose most important literary project is intended to offer a moral narrative that will reverse the biblical account of the fall and provide a liberating mythology for a new secular age.
The great enemy of humanity in the three books, The Golden Compass, The Subtle Knife, and The Amber Spyglass (together known as His Dark Materials) is the Christian church, identified as the evil Magisterium. The Magisterium, representing church authority, is afraid of human freedom and seeks to repress human sexuality.
The Magisterium uses the biblical narrative of the Fall and the doctrine of original sin to repress humanity. It is both violent and vile and it will stop at nothing to protect its own interests and to preserve its power.
Pullman's attack on biblical Christianity is direct and undeniable. He once questioned why his books attracted little controversy even as the Harry Potter books attracted so much. He told an Australian newspaper that what he is "saying things that are far more subversive than anything poor old Harry has said. My books are about killing God."
Will viewers of the movie see all this?
The direct attack on Christianity and God is toned down in the movie. But any informed person will recognize the Magisterium as representing the Church and Christianity. Of course, in our world the Magisterium is the authoritative leadership of the Roman Catholic Church. In Pullman's world it represents Christianity as a whole.